Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Gm27772-201ENSMUST00000184900 187 ntBASIC11.54□□□□□ -0.56
Smg1Q8BKX6 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.54□□□□□ -0.56
Smg1Q8BKX6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.54□□□□□ -0.56
Smg1Q8BKX6 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Gm12882-201ENSMUST00000121696 517 ntBASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Gm12217-201ENSMUST00000118858 696 ntBASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Gm14726-201ENSMUST00000120623 896 ntBASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Gm27438-201ENSMUST00000183480 110 ntBASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.53□□□□□ -0.56
Smg1Q8BKX6 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Gm45118-201ENSMUST00000208928 825 ntBASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Smg1Q8BKX6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smg1Q8BKX6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smg1Q8BKX6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smg1Q8BKX6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smg1Q8BKX6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smg1Q8BKX6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smg1Q8BKX6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.56
Smg1Q8BKX6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.52□□□□□ -0.56
Smg1Q8BKX6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Smg1Q8BKX6 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Smg1Q8BKX6 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Smg1Q8BKX6 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.52□□□□□ -0.56
Smg1Q8BKX6 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Smg1Q8BKX6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Gm13408-201ENSMUST00000119822 798 ntBASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Gm13935-201ENSMUST00000121859 798 ntBASIC11.52□□□□□ -0.57
Smg1Q8BKX6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Smg1Q8BKX6 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Gm24548-201ENSMUST00000158650 108 ntBASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Gm18027-201ENSMUST00000218947 619 ntBASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Smg1Q8BKX6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms