Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Mir6956-201ENSMUST00000183598 62 ntBASIC13.6□□□□□ -0.23
Trim50Q810I2 Gm27680-201ENSMUST00000184192 160 ntBASIC13.6□□□□□ -0.23
Trim50Q810I2 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.6□□□□□ -0.23
Trim50Q810I2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim50Q810I2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim50Q810I2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.6□□□□□ -0.23
Trim50Q810I2 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim50Q810I2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim50Q810I2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim50Q810I2 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.6□□□□□ -0.23
Trim50Q810I2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trim50Q810I2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trim50Q810I2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim50Q810I2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim50Q810I2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim50Q810I2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
Trim50Q810I2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim50Q810I2 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim50Q810I2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Gm14767-201ENSMUST00000121559 586 ntBASIC13.59□□□□□ -0.23
Trim50Q810I2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim50Q810I2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Gm25925-201ENSMUST00000158314 306 ntBASIC13.59□□□□□ -0.23
Trim50Q810I2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim50Q810I2 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.59□□□□□ -0.23
Trim50Q810I2 Gm17837-201ENSMUST00000186435 985 ntBASIC13.59□□□□□ -0.23
Trim50Q810I2 Gm44344-201ENSMUST00000200287 129 ntBASIC13.59□□□□□ -0.23
Trim50Q810I2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim50Q810I2 Gm44872-201ENSMUST00000207864 420 ntBASIC13.59□□□□□ -0.23
Trim50Q810I2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trim50Q810I2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trim50Q810I2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trim50Q810I2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim50Q810I2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trim50Q810I2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trim50Q810I2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trim50Q810I2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim50Q810I2 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim50Q810I2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim50Q810I2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.58□□□□□ -0.24
Trim50Q810I2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim50Q810I2 Gm13453-201ENSMUST00000118708 357 ntBASIC13.58□□□□□ -0.24
Trim50Q810I2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trim50Q810I2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim50Q810I2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim50Q810I2 Gm33320-201ENSMUST00000192232 530 ntBASIC13.58□□□□□ -0.24
Trim50Q810I2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim50Q810I2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim50Q810I2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim50Q810I2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim50Q810I2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim50Q810I2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms