Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Usp6nlQ80XC3 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Usp6nlQ80XC3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Usp6nlQ80XC3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp6nlQ80XC3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Usp6nlQ80XC3 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Gm24644-201ENSMUST00000157114 139 ntBASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Usp6nlQ80XC3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Gm18473-201ENSMUST00000220543 868 ntBASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Usp6nlQ80XC3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms