Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Gm23935-201ENSMUST00000102303 57 ntBASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Gm24270-201ENSMUST00000102326 57 ntBASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Mir449b-201ENSMUST00000104833 80 ntBASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Gm6415-201ENSMUST00000118488 348 ntBASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Gm24245-201ENSMUST00000157318 57 ntBASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Gm2756-201ENSMUST00000195851 400 ntBASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Gm6916-202ENSMUST00000205523 195 ntBASIC13.67□□□□□ -0.22
Ccdc116Q80X53 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc116Q80X53 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Gm24543-201ENSMUST00000103867 82 ntBASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Gm37714-201ENSMUST00000194742 342 ntBASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Gm18027-201ENSMUST00000218947 619 ntBASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc116Q80X53 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Gm2213-201ENSMUST00000197485 688 ntBASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.65□□□□□ -0.22
Ccdc116Q80X53 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Gm7774-201ENSMUST00000200064 533 ntBASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Gm15823-201ENSMUST00000064305 670 ntBASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc116Q80X53 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ccdc116Q80X53 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms