Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Gm15240-201ENSMUST00000118156 720 ntBASIC13.31□□□□□ -0.28
Vrk1Q80X41 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Gm18027-201ENSMUST00000218947 619 ntBASIC13.31□□□□□ -0.28
Vrk1Q80X41 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vrk1Q80X41 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.31□□□□□ -0.28
Vrk1Q80X41 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.31□□□□□ -0.28
Vrk1Q80X41 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.31□□□□□ -0.28
Vrk1Q80X41 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vrk1Q80X41 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vrk1Q80X41 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vrk1Q80X41 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.29□□□□□ -0.28
Vrk1Q80X41 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Gm11425-201ENSMUST00000119608 498 ntBASIC13.29□□□□□ -0.28
Vrk1Q80X41 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Gm9396-201ENSMUST00000076703 567 ntBASIC13.29□□□□□ -0.28
Vrk1Q80X41 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vrk1Q80X41 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vrk1Q80X41 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.28□□□□□ -0.28
Vrk1Q80X41 Gm6244-201ENSMUST00000178732 841 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms