Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm44487-201ENSMUST00000205145 325 ntBASIC13.48□□□□□ -0.25
Trim36Q80WG7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim36Q80WG7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim36Q80WG7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim36Q80WG7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trim36Q80WG7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim36Q80WG7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim36Q80WG7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim36Q80WG7 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim36Q80WG7 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.47□□□□□ -0.25
Trim36Q80WG7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Gm6973-201ENSMUST00000117080 721 ntBASIC13.47□□□□□ -0.25
Trim36Q80WG7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Trim36Q80WG7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.47□□□□□ -0.25
Trim36Q80WG7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim36Q80WG7 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.47□□□□□ -0.25
Trim36Q80WG7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.47□□□□□ -0.25
Trim36Q80WG7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim36Q80WG7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm22065-201ENSMUST00000103753 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm22066-201ENSMUST00000103761 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm24932-201ENSMUST00000103763 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm24115-201ENSMUST00000103799 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm22190-201ENSMUST00000103827 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm22191-201ENSMUST00000103831 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm24721-201ENSMUST00000103849 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm28018-201ENSMUST00000103869 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm26399-201ENSMUST00000103937 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm25349-201ENSMUST00000177728 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm23616-201ENSMUST00000177797 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm25871-201ENSMUST00000177816 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm24752-201ENSMUST00000178240 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm24496-201ENSMUST00000178287 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm25649-201ENSMUST00000178476 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm25548-201ENSMUST00000178681 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm23147-201ENSMUST00000178841 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm26095-201ENSMUST00000179270 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm22171-201ENSMUST00000179283 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm23936-201ENSMUST00000179354 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm22619-201ENSMUST00000179516 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm25255-201ENSMUST00000179579 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm24755-201ENSMUST00000179691 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm26506-201ENSMUST00000179692 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm25086-201ENSMUST00000179931 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm23243-201ENSMUST00000180047 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm24659-201ENSMUST00000180212 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm24169-201ENSMUST00000180244 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm23689-201ENSMUST00000180354 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm27359-201ENSMUST00000184153 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm27785-201ENSMUST00000184268 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm27466-201ENSMUST00000184396 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 Gm27703-201ENSMUST00000184836 110 ntBASIC13.46□□□□□ -0.25
Trim36Q80WG7 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim36Q80WG7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms