Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Gm12585-201ENSMUST00000117307 290 ntBASIC16.08■□□□□ 0.16
Prpf40bQ80W14 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Mir7654-201ENSMUST00000185082 70 ntBASIC16.08■□□□□ 0.16
Prpf40bQ80W14 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Prpf40bQ80W14 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Gm45784-201ENSMUST00000188360 142 ntBASIC16.07■□□□□ 0.16
Prpf40bQ80W14 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Gm17794-201ENSMUST00000220252 955 ntBASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Prpf40bQ80W14 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.06■□□□□ 0.16
Prpf40bQ80W14 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Mir1894-201ENSMUST00000122802 81 ntBASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Snora78-201ENSMUST00000158630 128 ntBASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Gm43179-201ENSMUST00000198797 275 ntBASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Gm6916-202ENSMUST00000205523 195 ntBASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Prpf40bQ80W14 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Prpf40bQ80W14 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms