Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Otop1Q80VM9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Otop1Q80VM9 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Gm14660-201ENSMUST00000119809 575 ntBASIC13.39□□□□□ -0.27
Otop1Q80VM9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.39□□□□□ -0.27
Otop1Q80VM9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.39□□□□□ -0.27
Otop1Q80VM9 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.39□□□□□ -0.27
Otop1Q80VM9 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.39□□□□□ -0.27
Otop1Q80VM9 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Otop1Q80VM9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.38□□□□□ -0.27
Otop1Q80VM9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Gm15198-201ENSMUST00000117283 177 ntBASIC13.38□□□□□ -0.27
Otop1Q80VM9 Gm11814-201ENSMUST00000119515 929 ntBASIC13.38□□□□□ -0.27
Otop1Q80VM9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Gm27731-201ENSMUST00000185192 107 ntBASIC13.38□□□□□ -0.27
Otop1Q80VM9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.38□□□□□ -0.27
Otop1Q80VM9 Gm2495-201ENSMUST00000191160 466 ntBASIC13.38□□□□□ -0.27
Otop1Q80VM9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.38□□□□□ -0.27
Otop1Q80VM9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.38□□□□□ -0.27
Otop1Q80VM9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Otop1Q80VM9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.37□□□□□ -0.27
Otop1Q80VM9 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Otop1Q80VM9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms