Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Mir7684-201ENSMUST00000183858 60 ntBASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Mir8102-201ENSMUST00000184148 139 ntBASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Mir7023-201ENSMUST00000185093 64 ntBASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Rpp38Q80UU2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Rpp38Q80UU2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Rpp38Q80UU2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Rpp38Q80UU2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Gm12151-201ENSMUST00000121374 290 ntBASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Gm15487-201ENSMUST00000122373 465 ntBASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Gm27838-201ENSMUST00000184829 128 ntBASIC13.89□□□□□ -0.19
Rpp38Q80UU2 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Rpp38Q80UU2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms