Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Gm13385-201ENSMUST00000121089 220 ntBASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pcdh19Q80TF3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Gm11918-201ENSMUST00000121660 179 ntBASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Gm24420-201ENSMUST00000176676 59 ntBASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Gm45384-201ENSMUST00000210451 277 ntBASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Gm9908-201ENSMUST00000211534 448 ntBASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdh19Q80TF3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Gm8927-201ENSMUST00000181978 981 ntBASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Gm3222-201ENSMUST00000071282 990 ntBASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Pcdh19Q80TF3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pcdh19Q80TF3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdh19Q80TF3 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms