Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 AC166349.1-201ENSMUST00000220866 695 ntBASIC15.24■□□□□ 0.03
Ush1gQ80T11 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.24■□□□□ 0.03
Ush1gQ80T11 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ush1gQ80T11 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Ush1gQ80T11 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.23■□□□□ 0.03
Ush1gQ80T11 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Gm15678-201ENSMUST00000117573 960 ntBASIC15.23■□□□□ 0.03
Ush1gQ80T11 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Mir1894-201ENSMUST00000122802 81 ntBASIC15.23■□□□□ 0.03
Ush1gQ80T11 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ush1gQ80T11 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.22■□□□□ 0.03
Ush1gQ80T11 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ush1gQ80T11 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ush1gQ80T11 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Ush1gQ80T11 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1gQ80T11 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1gQ80T11 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1gQ80T11 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1gQ80T11 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ush1gQ80T11 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1gQ80T11 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1gQ80T11 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.21■□□□□ 0.03
Ush1gQ80T11 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Ush1gQ80T11 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1gQ80T11 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1gQ80T11 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ush1gQ80T11 Gm6244-201ENSMUST00000178732 841 ntBASIC15.21■□□□□ 0.03
Ush1gQ80T11 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms