Protein–RNA interactions for Protein: Q80SS5

Ifna12, Interferon alpha-12, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna12Q80SS5 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna12Q80SS5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna12Q80SS5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna12Q80SS5 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna12Q80SS5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ifna12Q80SS5 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm29310-201ENSMUST00000185468 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21825-201ENSMUST00000185728 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm29109-201ENSMUST00000185895 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21896-201ENSMUST00000186520 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21873-201ENSMUST00000186728 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21794-201ENSMUST00000187056 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21880-201ENSMUST00000187275 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21826-201ENSMUST00000187451 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21198-201ENSMUST00000188393 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21749-201ENSMUST00000189343 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21901-201ENSMUST00000189568 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm29424-201ENSMUST00000189716 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm28599-201ENSMUST00000189838 694 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21867-201ENSMUST00000189917 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm29269-201ENSMUST00000190087 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21722-201ENSMUST00000190153 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm28423-201ENSMUST00000190701 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21899-201ENSMUST00000190745 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21910-201ENSMUST00000191163 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21849-201ENSMUST00000191571 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm28678-201ENSMUST00000191593 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm20910-201ENSMUST00000193268 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm21871-201ENSMUST00000194621 696 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.31□□□□□ -0.6
Ifna12Q80SS5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.3□□□□□ -0.6
Ifna12Q80SS5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms