Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx55Q6ZPL9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx55Q6ZPL9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx55Q6ZPL9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.77■□□□□ 0.11
Ddx55Q6ZPL9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Gm11793-201ENSMUST00000120433 981 ntBASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Gm13342-201ENSMUST00000121055 207 ntBASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Gm37497-201ENSMUST00000195830 798 ntBASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Gm18056-201ENSMUST00000207670 568 ntBASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Gm18061-201ENSMUST00000208350 562 ntBASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Gm18063-201ENSMUST00000208529 568 ntBASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Gm18052-201ENSMUST00000208750 559 ntBASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ddx55Q6ZPL9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Gm13369-201ENSMUST00000119442 987 ntBASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Gm42627-201ENSMUST00000197347 224 ntBASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Gm43758-201ENSMUST00000199500 367 ntBASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ddx55Q6ZPL9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.74■□□□□ 0.11
Ddx55Q6ZPL9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms