Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shc4Q6S5L9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Shc4Q6S5L9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.06□□□□□ -0.32
Shc4Q6S5L9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Gm21854-201ENSMUST00000179901 471 ntBASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Gm37917-201ENSMUST00000194711 392 ntBASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Gm18018-201ENSMUST00000198273 408 ntBASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shc4Q6S5L9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Gm12882-201ENSMUST00000121696 517 ntBASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Gm12091-201ENSMUST00000146791 830 ntBASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Gm10766-202ENSMUST00000194123 606 ntBASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Gm15823-201ENSMUST00000064305 670 ntBASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Shc4Q6S5L9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shc4Q6S5L9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms