Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.72□□□□□ -0.53
Rif1Q6PR54 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rif1Q6PR54 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Rif1Q6PR54 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Gm25545-201ENSMUST00000122673 323 ntBASIC11.71□□□□□ -0.53
Rif1Q6PR54 Gm13570-201ENSMUST00000140763 309 ntBASIC11.71□□□□□ -0.53
Rif1Q6PR54 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.71□□□□□ -0.53
Rif1Q6PR54 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rif1Q6PR54 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Gm15276-201ENSMUST00000145953 498 ntBASIC11.71□□□□□ -0.54
Rif1Q6PR54 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.71□□□□□ -0.54
Rif1Q6PR54 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rif1Q6PR54 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.7□□□□□ -0.54
Rif1Q6PR54 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Gm7902-201ENSMUST00000198842 947 ntBASIC11.7□□□□□ -0.54
Rif1Q6PR54 Gm4607-201ENSMUST00000206649 577 ntBASIC11.7□□□□□ -0.54
Rif1Q6PR54 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.7□□□□□ -0.54
Rif1Q6PR54 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC11.7□□□□□ -0.54
Rif1Q6PR54 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Rif1Q6PR54 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms