Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scaf4Q6PFF0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Scaf4Q6PFF0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scaf4Q6PFF0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Gm11543-201ENSMUST00000120758 370 ntBASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Scaf4Q6PFF0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scaf4Q6PFF0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms