Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nup98Q6PFD9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Gm45841-201ENSMUST00000207700 164 ntBASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nup98Q6PFD9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Gm43818-201ENSMUST00000200605 466 ntBASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nup98Q6PFD9 Gm11978-201ENSMUST00000122315 466 ntBASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 AC140406.1-201ENSMUST00000226481 465 ntBASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.12■□□□□ 0.17
Nup98Q6PFD9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup98Q6PFD9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms