Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Gm6013-201ENSMUST00000212264 699 ntBASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 CT009713.10-202ENSMUST00000225734 696 ntBASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 AC134335.2-201ENSMUST00000227660 440 ntBASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Chd4Q6PDQ2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Snord83b-201ENSMUST00000104546 94 ntBASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Chd4Q6PDQ2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Gm5896-201ENSMUST00000189662 1024 ntBASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Gm28693-202ENSMUST00000190758 331 ntBASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Gm38241-201ENSMUST00000192641 898 ntBASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Gm25261-201ENSMUST00000157416 134 ntBASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Gm29396-201ENSMUST00000185659 716 ntBASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 n-R5s195-201ENSMUST00000082891 119 ntBASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC17.86■□□□□ 0.45
Chd4Q6PDQ2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Gm9431-201ENSMUST00000119765 1051 ntBASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Gm11978-201ENSMUST00000122315 466 ntBASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Gm25927-201ENSMUST00000175058 117 ntBASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Chd4Q6PDQ2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Gm37008-201ENSMUST00000195712 319 ntBASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Chd4Q6PDQ2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms