Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
ShbQ6PD21 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.85□□□□□ -0.03
ShbQ6PD21 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ShbQ6PD21 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.85□□□□□ -0.03
ShbQ6PD21 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ShbQ6PD21 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.85□□□□□ -0.03
ShbQ6PD21 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.85□□□□□ -0.03
ShbQ6PD21 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Gm4768-201ENSMUST00000206199 686 ntBASIC14.85□□□□□ -0.03
ShbQ6PD21 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.85□□□□□ -0.03
ShbQ6PD21 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.85□□□□□ -0.03
ShbQ6PD21 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ShbQ6PD21 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.84□□□□□ -0.03
ShbQ6PD21 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Gm13570-201ENSMUST00000140763 309 ntBASIC14.84□□□□□ -0.03
ShbQ6PD21 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ShbQ6PD21 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ShbQ6PD21 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ShbQ6PD21 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 AU022133-201ENSMUST00000200601 873 ntBASIC14.84□□□□□ -0.03
ShbQ6PD21 Gm44967-201ENSMUST00000207047 631 ntBASIC14.84□□□□□ -0.03
ShbQ6PD21 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.84□□□□□ -0.03
ShbQ6PD21 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.84□□□□□ -0.03
ShbQ6PD21 Gm13097-201ENSMUST00000210722 397 ntBASIC14.84□□□□□ -0.03
ShbQ6PD21 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.84□□□□□ -0.03
ShbQ6PD21 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.84□□□□□ -0.03
ShbQ6PD21 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.84□□□□□ -0.03
ShbQ6PD21 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ShbQ6PD21 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.84□□□□□ -0.03
ShbQ6PD21 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
ShbQ6PD21 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ShbQ6PD21 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
ShbQ6PD21 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.84□□□□□ -0.03
ShbQ6PD21 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ShbQ6PD21 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.84□□□□□ -0.03
ShbQ6PD21 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
ShbQ6PD21 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ShbQ6PD21 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
ShbQ6PD21 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.83□□□□□ -0.03
ShbQ6PD21 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.83□□□□□ -0.03
ShbQ6PD21 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShbQ6PD21 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
ShbQ6PD21 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShbQ6PD21 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShbQ6PD21 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShbQ6PD21 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShbQ6PD21 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShbQ6PD21 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.83□□□□□ -0.04
ShbQ6PD21 Gm14277-201ENSMUST00000121195 360 ntBASIC14.83□□□□□ -0.04
ShbQ6PD21 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.83□□□□□ -0.04
ShbQ6PD21 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ShbQ6PD21 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ShbQ6PD21 Gm38317-201ENSMUST00000195564 343 ntBASIC14.83□□□□□ -0.04
ShbQ6PD21 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.83□□□□□ -0.04
ShbQ6PD21 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShbQ6PD21 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ShbQ6PD21 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShbQ6PD21 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShbQ6PD21 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ShbQ6PD21 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ShbQ6PD21 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShbQ6PD21 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShbQ6PD21 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShbQ6PD21 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShbQ6PD21 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ShbQ6PD21 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ShbQ6PD21 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms