Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Gm12260-201ENSMUST00000122447 411 ntBASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Smarcd3Q6P9Z1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Gm11025-201ENSMUST00000140773 466 ntBASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Gm27525-201ENSMUST00000184465 107 ntBASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Smarcd3Q6P9Z1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd3Q6P9Z1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd3Q6P9Z1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd3Q6P9Z1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd3Q6P9Z1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Smarcd3Q6P9Z1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd3Q6P9Z1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Smarcd3Q6P9Z1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Smarcd3Q6P9Z1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd3Q6P9Z1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Smarcd3Q6P9Z1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Smarcd3Q6P9Z1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms