Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC16.51■□□□□ 0.23
Col11a2Q64739 Gm14263-201ENSMUST00000117955 746 ntBASIC16.51■□□□□ 0.23
Col11a2Q64739 Gm14277-201ENSMUST00000121195 360 ntBASIC16.51■□□□□ 0.23
Col11a2Q64739 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col11a2Q64739 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC16.51■□□□□ 0.23
Col11a2Q64739 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC16.51■□□□□ 0.23
Col11a2Q64739 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.51■□□□□ 0.23
Col11a2Q64739 AC069562.3-201ENSMUST00000225387 587 ntBASIC16.51■□□□□ 0.23
Col11a2Q64739 AC126253.1-202ENSMUST00000226732 835 ntBASIC16.51■□□□□ 0.23
Col11a2Q64739 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Col11a2Q64739 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC16.51■□□□□ 0.23
Col11a2Q64739 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Col11a2Q64739 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.51■□□□□ 0.23
Col11a2Q64739 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col11a2Q64739 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col11a2Q64739 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.51■□□□□ 0.23
Col11a2Q64739 Gm10434-201ENSMUST00000101158 471 ntBASIC16.5■□□□□ 0.23
Col11a2Q64739 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC16.5■□□□□ 0.23
Col11a2Q64739 Gm15782-201ENSMUST00000121073 445 ntBASIC16.5■□□□□ 0.23
Col11a2Q64739 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.5■□□□□ 0.23
Col11a2Q64739 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.5■□□□□ 0.23
Col11a2Q64739 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Gm8805-201ENSMUST00000117848 313 ntBASIC16.5■□□□□ 0.23
Col11a2Q64739 Gm13570-201ENSMUST00000140763 309 ntBASIC16.5■□□□□ 0.23
Col11a2Q64739 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Gm8738-201ENSMUST00000172606 329 ntBASIC16.5■□□□□ 0.23
Col11a2Q64739 Gm37986-201ENSMUST00000193285 383 ntBASIC16.5■□□□□ 0.23
Col11a2Q64739 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC16.5■□□□□ 0.23
Col11a2Q64739 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC16.5■□□□□ 0.23
Col11a2Q64739 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Gm15897-201ENSMUST00000117770 1486 ntBASIC16.5■□□□□ 0.23
Col11a2Q64739 Gm19221-201ENSMUST00000221827 1477 ntBASIC16.5■□□□□ 0.23
Col11a2Q64739 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col11a2Q64739 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col11a2Q64739 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Col11a2Q64739 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Gm23200-201ENSMUST00000104379 132 ntBASIC16.49■□□□□ 0.23
Col11a2Q64739 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Col11a2Q64739 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC16.49■□□□□ 0.23
Col11a2Q64739 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.49■□□□□ 0.23
Col11a2Q64739 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC16.49■□□□□ 0.23
Col11a2Q64739 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC16.49■□□□□ 0.23
Col11a2Q64739 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Col11a2Q64739 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col11a2Q64739 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col11a2Q64739 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a2Q64739 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a2Q64739 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col11a2Q64739 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col11a2Q64739 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.48■□□□□ 0.23
Col11a2Q64739 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a2Q64739 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a2Q64739 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a2Q64739 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a2Q64739 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col11a2Q64739 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col11a2Q64739 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms