Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.62■□□□□ 0.41
Clcn1Q64347 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Clcn1Q64347 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.62■□□□□ 0.41
Clcn1Q64347 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.62■□□□□ 0.41
Clcn1Q64347 Gm26464-201ENSMUST00000157094 305 ntBASIC17.62■□□□□ 0.41
Clcn1Q64347 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC17.62■□□□□ 0.41
Clcn1Q64347 Gm37424-201ENSMUST00000191727 561 ntBASIC17.62■□□□□ 0.41
Clcn1Q64347 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.62■□□□□ 0.41
Clcn1Q64347 Mir497b-201ENSMUST00000093601 125 ntBASIC17.62■□□□□ 0.41
Clcn1Q64347 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Clcn1Q64347 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Clcn1Q64347 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.62■□□□□ 0.41
Clcn1Q64347 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Clcn1Q64347 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clcn1Q64347 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn1Q64347 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.61■□□□□ 0.41
Clcn1Q64347 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn1Q64347 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn1Q64347 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn1Q64347 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.61■□□□□ 0.41
Clcn1Q64347 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.61■□□□□ 0.41
Clcn1Q64347 Gm27731-201ENSMUST00000185192 107 ntBASIC17.61■□□□□ 0.41
Clcn1Q64347 Gm45784-201ENSMUST00000188360 142 ntBASIC17.61■□□□□ 0.41
Clcn1Q64347 Gm38230-201ENSMUST00000193572 1159 ntBASIC17.61■□□□□ 0.41
Clcn1Q64347 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn1Q64347 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Clcn1Q64347 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.61■□□□□ 0.41
Clcn1Q64347 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn1Q64347 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn1Q64347 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn1Q64347 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.61■□□□□ 0.41
Clcn1Q64347 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn1Q64347 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clcn1Q64347 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clcn1Q64347 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.6■□□□□ 0.41
Clcn1Q64347 Gm27847-201ENSMUST00000183711 107 ntBASIC17.6■□□□□ 0.41
Clcn1Q64347 Gm27375-201ENSMUST00000183799 107 ntBASIC17.6■□□□□ 0.41
Clcn1Q64347 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC17.6■□□□□ 0.41
Clcn1Q64347 Gm44608-201ENSMUST00000206827 855 ntBASIC17.6■□□□□ 0.41
Clcn1Q64347 Gm5425-201ENSMUST00000214125 459 ntBASIC17.6■□□□□ 0.41
Clcn1Q64347 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.6■□□□□ 0.41
Clcn1Q64347 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Clcn1Q64347 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Clcn1Q64347 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clcn1Q64347 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Clcn1Q64347 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Clcn1Q64347 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn1Q64347 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn1Q64347 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn1Q64347 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.59■□□□□ 0.41
Clcn1Q64347 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn1Q64347 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.59■□□□□ 0.41
Clcn1Q64347 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.59■□□□□ 0.41
Clcn1Q64347 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.59■□□□□ 0.41
Clcn1Q64347 Gm11814-201ENSMUST00000119515 929 ntBASIC17.59■□□□□ 0.41
Clcn1Q64347 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.59■□□□□ 0.41
Clcn1Q64347 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.59■□□□□ 0.41
Clcn1Q64347 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC17.59■□□□□ 0.41
Clcn1Q64347 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.59■□□□□ 0.41
Clcn1Q64347 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.59■□□□□ 0.41
Clcn1Q64347 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC17.59■□□□□ 0.41
Clcn1Q64347 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn1Q64347 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn1Q64347 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn1Q64347 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn1Q64347 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Clcn1Q64347 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clcn1Q64347 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn1Q64347 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn1Q64347 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn1Q64347 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn1Q64347 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn1Q64347 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn1Q64347 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.58■□□□□ 0.41
Clcn1Q64347 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn1Q64347 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.58■□□□□ 0.41
Clcn1Q64347 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clcn1Q64347 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms