Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Gm24830-201ENSMUST00000102024 166 ntBASIC12.91□□□□□ -0.34
AtmQ62388 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.91□□□□□ -0.34
AtmQ62388 Gm25890-201ENSMUST00000177643 165 ntBASIC12.91□□□□□ -0.34
AtmQ62388 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.91□□□□□ -0.34
AtmQ62388 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.91□□□□□ -0.34
AtmQ62388 Gm22614-201ENSMUST00000178300 165 ntBASIC12.91□□□□□ -0.34
AtmQ62388 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.91□□□□□ -0.34
AtmQ62388 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.91□□□□□ -0.34
AtmQ62388 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
AtmQ62388 Gm22042-201ENSMUST00000082989 165 ntBASIC12.91□□□□□ -0.34
AtmQ62388 Gm26232-201ENSMUST00000083360 166 ntBASIC12.91□□□□□ -0.34
AtmQ62388 Gm24136-201ENSMUST00000083374 165 ntBASIC12.91□□□□□ -0.34
AtmQ62388 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.91□□□□□ -0.34
AtmQ62388 Gm26110-201ENSMUST00000083971 165 ntBASIC12.91□□□□□ -0.34
AtmQ62388 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.91□□□□□ -0.34
AtmQ62388 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
AtmQ62388 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
AtmQ62388 Gm43058-201ENSMUST00000197645 625 ntBASIC12.9□□□□□ -0.34
AtmQ62388 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.9□□□□□ -0.34
AtmQ62388 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.9□□□□□ -0.34
AtmQ62388 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.9□□□□□ -0.34
AtmQ62388 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
AtmQ62388 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
AtmQ62388 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
AtmQ62388 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
AtmQ62388 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.9□□□□□ -0.34
AtmQ62388 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.9□□□□□ -0.34
AtmQ62388 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.9□□□□□ -0.34
AtmQ62388 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
AtmQ62388 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
AtmQ62388 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AtmQ62388 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
AtmQ62388 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.9□□□□□ -0.35
AtmQ62388 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
AtmQ62388 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
AtmQ62388 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.9□□□□□ -0.35
AtmQ62388 Gm13316-201ENSMUST00000140537 691 ntBASIC12.9□□□□□ -0.35
AtmQ62388 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
AtmQ62388 Gm24420-201ENSMUST00000176676 59 ntBASIC12.9□□□□□ -0.35
AtmQ62388 Gm42550-201ENSMUST00000201553 960 ntBASIC12.9□□□□□ -0.35
AtmQ62388 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.9□□□□□ -0.35
AtmQ62388 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
AtmQ62388 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
AtmQ62388 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
AtmQ62388 Gm24447-201ENSMUST00000083977 338 ntBASIC12.9□□□□□ -0.35
AtmQ62388 Gm10268-201ENSMUST00000085340 555 ntBASIC12.9□□□□□ -0.35
AtmQ62388 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AtmQ62388 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AtmQ62388 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
AtmQ62388 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.89□□□□□ -0.35
AtmQ62388 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AtmQ62388 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.89□□□□□ -0.35
AtmQ62388 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
AtmQ62388 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC12.89□□□□□ -0.35
AtmQ62388 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AtmQ62388 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AtmQ62388 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.89□□□□□ -0.35
AtmQ62388 Gm11964-201ENSMUST00000120982 444 ntBASIC12.89□□□□□ -0.35
AtmQ62388 Gm45118-201ENSMUST00000208928 825 ntBASIC12.89□□□□□ -0.35
AtmQ62388 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.89□□□□□ -0.35
AtmQ62388 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
AtmQ62388 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AtmQ62388 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.89□□□□□ -0.35
AtmQ62388 Gm26315-201ENSMUST00000083890 321 ntBASIC12.89□□□□□ -0.35
AtmQ62388 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AtmQ62388 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
AtmQ62388 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
AtmQ62388 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AtmQ62388 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
AtmQ62388 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
AtmQ62388 Gm11667-201ENSMUST00000119828 486 ntBASIC12.89□□□□□ -0.35
AtmQ62388 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
AtmQ62388 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.89□□□□□ -0.35
AtmQ62388 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
AtmQ62388 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.89□□□□□ -0.35
AtmQ62388 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.89□□□□□ -0.35
AtmQ62388 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms