Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Notch3Q61982 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Notch3Q61982 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.74□□□□□ -0.69
Notch3Q61982 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Notch3Q61982 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Notch3Q61982 Gm6222-201ENSMUST00000120787 396 ntBASIC10.74□□□□□ -0.69
Notch3Q61982 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.74□□□□□ -0.69
Notch3Q61982 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Gm45098-201ENSMUST00000207179 657 ntBASIC10.74□□□□□ -0.69
Notch3Q61982 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.74□□□□□ -0.69
Notch3Q61982 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Notch3Q61982 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Notch3Q61982 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Notch3Q61982 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Notch3Q61982 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC10.74□□□□□ -0.69
Notch3Q61982 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.74□□□□□ -0.69
Notch3Q61982 Gm12091-201ENSMUST00000146791 830 ntBASIC10.74□□□□□ -0.69
Notch3Q61982 AA619741-201ENSMUST00000195095 646 ntBASIC10.74□□□□□ -0.69
Notch3Q61982 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.74□□□□□ -0.69
Notch3Q61982 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Notch3Q61982 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.74□□□□□ -0.69
Notch3Q61982 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.74□□□□□ -0.69
Notch3Q61982 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Notch3Q61982 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.74□□□□□ -0.69
Notch3Q61982 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Notch3Q61982 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Notch3Q61982 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.73□□□□□ -0.69
Notch3Q61982 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.73□□□□□ -0.69
Notch3Q61982 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Notch3Q61982 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Notch3Q61982 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Gm13464-201ENSMUST00000119418 935 ntBASIC10.73□□□□□ -0.69
Notch3Q61982 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.73□□□□□ -0.69
Notch3Q61982 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Mir6392-201ENSMUST00000184924 108 ntBASIC10.73□□□□□ -0.69
Notch3Q61982 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.73□□□□□ -0.69
Notch3Q61982 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.73□□□□□ -0.69
Notch3Q61982 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Gm37728-201ENSMUST00000195025 2292 ntBASIC10.73□□□□□ -0.69
Notch3Q61982 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Notch3Q61982 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Notch3Q61982 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC10.73□□□□□ -0.69
Notch3Q61982 Gm10766-202ENSMUST00000194123 606 ntBASIC10.73□□□□□ -0.69
Notch3Q61982 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.73□□□□□ -0.69
Notch3Q61982 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Notch3Q61982 Gm15823-201ENSMUST00000064305 670 ntBASIC10.73□□□□□ -0.69
Notch3Q61982 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Notch3Q61982 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Notch3Q61982 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Notch3Q61982 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Notch3Q61982 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Notch3Q61982 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms