Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ecm1Q61508 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
Ecm1Q61508 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ecm1Q61508 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.33■□□□□ 0.04
Ecm1Q61508 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ecm1Q61508 Gm1335-201ENSMUST00000121653 386 ntBASIC15.33■□□□□ 0.04
Ecm1Q61508 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Ecm1Q61508 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.33■□□□□ 0.04
Ecm1Q61508 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.33■□□□□ 0.04
Ecm1Q61508 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Ecm1Q61508 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ecm1Q61508 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ecm1Q61508 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ecm1Q61508 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ecm1Q61508 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ecm1Q61508 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Ecm1Q61508 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Ecm1Q61508 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.32■□□□□ 0.04
Ecm1Q61508 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.32■□□□□ 0.04
Ecm1Q61508 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.32■□□□□ 0.04
Ecm1Q61508 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.32■□□□□ 0.04
Ecm1Q61508 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.32■□□□□ 0.04
Ecm1Q61508 Gm12403-201ENSMUST00000121384 959 ntBASIC15.32■□□□□ 0.04
Ecm1Q61508 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.32■□□□□ 0.04
Ecm1Q61508 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.32■□□□□ 0.04
Ecm1Q61508 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.32■□□□□ 0.04
Ecm1Q61508 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.32■□□□□ 0.04
Ecm1Q61508 Gm2445-201ENSMUST00000182798 989 ntBASIC15.32■□□□□ 0.04
Ecm1Q61508 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Gm7172-201ENSMUST00000218047 1152 ntBASIC15.32■□□□□ 0.04
Ecm1Q61508 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ecm1Q61508 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ecm1Q61508 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.32■□□□□ 0.04
Ecm1Q61508 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ecm1Q61508 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Ecm1Q61508 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ecm1Q61508 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ecm1Q61508 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.31■□□□□ 0.04
Ecm1Q61508 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.31■□□□□ 0.04
Ecm1Q61508 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ecm1Q61508 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.31■□□□□ 0.04
Ecm1Q61508 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.31■□□□□ 0.04
Ecm1Q61508 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.31■□□□□ 0.04
Ecm1Q61508 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.31■□□□□ 0.04
Ecm1Q61508 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 AC154276.1-201ENSMUST00000228874 1299 ntBASIC15.31■□□□□ 0.04
Ecm1Q61508 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Gm9823-201ENSMUST00000051212 327 ntBASIC15.31■□□□□ 0.04
Ecm1Q61508 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.31■□□□□ 0.04
Ecm1Q61508 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.31■□□□□ 0.04
Ecm1Q61508 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.31■□□□□ 0.04
Ecm1Q61508 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ecm1Q61508 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms