Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx2Q61412 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx2Q61412 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vsx2Q61412 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vsx2Q61412 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.62□□□□□ -0.23
Vsx2Q61412 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vsx2Q61412 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vsx2Q61412 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Vsx2Q61412 Gm13453-201ENSMUST00000118708 357 ntBASIC13.62□□□□□ -0.23
Vsx2Q61412 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Gm10275-202ENSMUST00000168697 495 ntBASIC13.62□□□□□ -0.23
Vsx2Q61412 Gm27533-201ENSMUST00000183800 152 ntBASIC13.62□□□□□ -0.23
Vsx2Q61412 Gm20949-201ENSMUST00000206478 952 ntBASIC13.62□□□□□ -0.23
Vsx2Q61412 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.62□□□□□ -0.23
Vsx2Q61412 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Vsx2Q61412 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Gm10275-201ENSMUST00000092620 635 ntBASIC13.62□□□□□ -0.23
Vsx2Q61412 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Vsx2Q61412 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vsx2Q61412 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.61□□□□□ -0.23
Vsx2Q61412 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
Vsx2Q61412 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.61□□□□□ -0.23
Vsx2Q61412 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.61□□□□□ -0.23
Vsx2Q61412 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Mir7023-201ENSMUST00000185093 64 ntBASIC13.61□□□□□ -0.23
Vsx2Q61412 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Gm45453-201ENSMUST00000211758 853 ntBASIC13.61□□□□□ -0.23
Vsx2Q61412 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.61□□□□□ -0.23
Vsx2Q61412 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vsx2Q61412 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vsx2Q61412 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Vsx2Q61412 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Vsx2Q61412 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Vsx2Q61412 Mir1897-201ENSMUST00000122581 272 ntBASIC13.6□□□□□ -0.23
Vsx2Q61412 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.6□□□□□ -0.23
Vsx2Q61412 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Vsx2Q61412 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Vsx2Q61412 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vsx2Q61412 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.6□□□□□ -0.23
Vsx2Q61412 Dupd1-202ENSMUST00000224735 548 ntBASIC13.6□□□□□ -0.23
Vsx2Q61412 Shd-206ENSMUST00000225145 998 ntBASIC13.6□□□□□ -0.23
Vsx2Q61412 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.6□□□□□ -0.23
Vsx2Q61412 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.6□□□□□ -0.23
Vsx2Q61412 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vsx2Q61412 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vsx2Q61412 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Vsx2Q61412 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms