Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Mre11Q61216 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.7■□□□□ 0.26
Mre11Q61216 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.7■□□□□ 0.26
Mre11Q61216 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.7■□□□□ 0.26
Mre11Q61216 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.7■□□□□ 0.26
Mre11Q61216 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Gm7787-201ENSMUST00000216858 688 ntBASIC16.7■□□□□ 0.26
Mre11Q61216 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.7■□□□□ 0.26
Mre11Q61216 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Mre11Q61216 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Mre11Q61216 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Mre11Q61216 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Mre11Q61216 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Mre11Q61216 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Mre11Q61216 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Mre11Q61216 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.69■□□□□ 0.26
Mre11Q61216 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Gm43463-201ENSMUST00000195967 1803 ntBASIC16.69■□□□□ 0.26
Mre11Q61216 Gm45098-201ENSMUST00000207179 657 ntBASIC16.69■□□□□ 0.26
Mre11Q61216 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Mre11Q61216 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Mre11Q61216 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Mre11Q61216 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Mre11Q61216 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.69■□□□□ 0.26
Mre11Q61216 Syt7-205ENSMUST00000224135 1557 ntBASIC16.68■□□□□ 0.26
Mre11Q61216 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mre11Q61216 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mre11Q61216 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mre11Q61216 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mre11Q61216 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.68■□□□□ 0.26
Mre11Q61216 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Mre11Q61216 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Mre11Q61216 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.68■□□□□ 0.26
Mre11Q61216 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Mre11Q61216 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mre11Q61216 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mre11Q61216 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mre11Q61216 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Mre11Q61216 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.68■□□□□ 0.26
Mre11Q61216 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mre11Q61216 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mre11Q61216 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mre11Q61216 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mre11Q61216 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Mre11Q61216 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mre11Q61216 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Mre11Q61216 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.67■□□□□ 0.26
Mre11Q61216 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Mre11Q61216 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC16.67■□□□□ 0.26
Mre11Q61216 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Mre11Q61216 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Mre11Q61216 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.67■□□□□ 0.26
Mre11Q61216 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.67■□□□□ 0.26
Mre11Q61216 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.67■□□□□ 0.26
Mre11Q61216 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Mre11Q61216 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Mre11Q61216 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Mre11Q61216 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Mre11Q61216 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Mre11Q61216 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mre11Q61216 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms