Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Col12a1Q60847 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col12a1Q60847 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col12a1Q60847 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Col12a1Q60847 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col12a1Q60847 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col12a1Q60847 Gm27552-201ENSMUST00000183351 62 ntBASIC13.46□□□□□ -0.26
Col12a1Q60847 Gm27844-201ENSMUST00000183613 62 ntBASIC13.46□□□□□ -0.26
Col12a1Q60847 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.46□□□□□ -0.26
Col12a1Q60847 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col12a1Q60847 Gm8385-201ENSMUST00000058999 643 ntBASIC13.46□□□□□ -0.26
Col12a1Q60847 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Col12a1Q60847 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Col12a1Q60847 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.46□□□□□ -0.26
Col12a1Q60847 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Col12a1Q60847 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.45□□□□□ -0.26
Col12a1Q60847 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col12a1Q60847 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.45□□□□□ -0.26
Col12a1Q60847 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Col12a1Q60847 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.45□□□□□ -0.26
Col12a1Q60847 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.45□□□□□ -0.26
Col12a1Q60847 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.45□□□□□ -0.26
Col12a1Q60847 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col12a1Q60847 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col12a1Q60847 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.45□□□□□ -0.26
Col12a1Q60847 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col12a1Q60847 Gm25214-201ENSMUST00000104573 129 ntBASIC13.45□□□□□ -0.26
Col12a1Q60847 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Col12a1Q60847 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Col12a1Q60847 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.45□□□□□ -0.26
Col12a1Q60847 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Col12a1Q60847 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.44□□□□□ -0.26
Col12a1Q60847 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC13.44□□□□□ -0.26
Col12a1Q60847 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Col12a1Q60847 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Gm44999-201ENSMUST00000207456 1493 ntBASIC13.44□□□□□ -0.26
Col12a1Q60847 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.44□□□□□ -0.26
Col12a1Q60847 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.44□□□□□ -0.26
Col12a1Q60847 Gm11597-201ENSMUST00000121423 964 ntBASIC13.44□□□□□ -0.26
Col12a1Q60847 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.44□□□□□ -0.26
Col12a1Q60847 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
Col12a1Q60847 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.44□□□□□ -0.26
Col12a1Q60847 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Gm2231-201ENSMUST00000125661 612 ntBASIC13.44□□□□□ -0.26
Col12a1Q60847 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.44□□□□□ -0.26
Col12a1Q60847 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.44□□□□□ -0.26
Col12a1Q60847 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col12a1Q60847 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Col12a1Q60847 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.43□□□□□ -0.26
Col12a1Q60847 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col12a1Q60847 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.43□□□□□ -0.26
Col12a1Q60847 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Col12a1Q60847 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.43□□□□□ -0.26
Col12a1Q60847 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col12a1Q60847 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms