Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prdm1Q60636 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prdm1Q60636 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Prdm1Q60636 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prdm1Q60636 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.28■□□□□ 0.2
Prdm1Q60636 Mir6977-201ENSMUST00000184960 64 ntBASIC16.28■□□□□ 0.2
Prdm1Q60636 Gm29741-201ENSMUST00000192667 421 ntBASIC16.28■□□□□ 0.2
Prdm1Q60636 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.28■□□□□ 0.2
Prdm1Q60636 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prdm1Q60636 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prdm1Q60636 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prdm1Q60636 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.28■□□□□ 0.2
Prdm1Q60636 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prdm1Q60636 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.28■□□□□ 0.2
Prdm1Q60636 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Prdm1Q60636 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Prdm1Q60636 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prdm1Q60636 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Prdm1Q60636 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prdm1Q60636 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Prdm1Q60636 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prdm1Q60636 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Prdm1Q60636 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Prdm1Q60636 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Prdm1Q60636 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.27■□□□□ 0.2
Prdm1Q60636 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prdm1Q60636 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.27■□□□□ 0.2
Prdm1Q60636 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Prdm1Q60636 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Prdm1Q60636 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.27■□□□□ 0.2
Prdm1Q60636 Gm21854-201ENSMUST00000179901 471 ntBASIC16.27■□□□□ 0.2
Prdm1Q60636 Gm8927-201ENSMUST00000181978 981 ntBASIC16.27■□□□□ 0.2
Prdm1Q60636 Gm27437-201ENSMUST00000183429 107 ntBASIC16.27■□□□□ 0.2
Prdm1Q60636 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prdm1Q60636 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Prdm1Q60636 Gm3222-201ENSMUST00000071282 990 ntBASIC16.27■□□□□ 0.2
Prdm1Q60636 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Prdm1Q60636 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prdm1Q60636 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Prdm1Q60636 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prdm1Q60636 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.27■□□□□ 0.19
Prdm1Q60636 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prdm1Q60636 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prdm1Q60636 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Prdm1Q60636 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Prdm1Q60636 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Prdm1Q60636 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prdm1Q60636 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prdm1Q60636 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prdm1Q60636 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Prdm1Q60636 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.27■□□□□ 0.19
Prdm1Q60636 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prdm1Q60636 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.26■□□□□ 0.19
Prdm1Q60636 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prdm1Q60636 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prdm1Q60636 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prdm1Q60636 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.26■□□□□ 0.19
Prdm1Q60636 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prdm1Q60636 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prdm1Q60636 Gm7730-201ENSMUST00000212486 454 ntBASIC16.26■□□□□ 0.19
Prdm1Q60636 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prdm1Q60636 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prdm1Q60636 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prdm1Q60636 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prdm1Q60636 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Prdm1Q60636 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Prdm1Q60636 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Prdm1Q60636 Syt7-205ENSMUST00000224135 1557 ntBASIC16.26■□□□□ 0.19
Prdm1Q60636 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prdm1Q60636 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prdm1Q60636 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prdm1Q60636 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prdm1Q60636 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prdm1Q60636 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.25■□□□□ 0.19
Prdm1Q60636 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prdm1Q60636 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Prdm1Q60636 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prdm1Q60636 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prdm1Q60636 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prdm1Q60636 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prdm1Q60636 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.25■□□□□ 0.19
Prdm1Q60636 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prdm1Q60636 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Prdm1Q60636 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.25■□□□□ 0.19
Prdm1Q60636 Gm9797-201ENSMUST00000052902 613 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms