Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Vps54Q5SPW0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Gm28631-201ENSMUST00000190740 334 ntBASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Gm5279-201ENSMUST00000199575 745 ntBASIC16.71■□□□□ 0.27
Vps54Q5SPW0 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Vps54Q5SPW0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Vps54Q5SPW0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Vps54Q5SPW0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Gm2445-201ENSMUST00000182798 989 ntBASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Vps54Q5SPW0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Mir698-201ENSMUST00000102164 109 ntBASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Gm14928-201ENSMUST00000120198 477 ntBASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Gm37917-201ENSMUST00000194711 392 ntBASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vps54Q5SPW0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vps54Q5SPW0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms