Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Mir698-201ENSMUST00000102164 109 ntBASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Gm13689-201ENSMUST00000119360 685 ntBASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Gm18187-201ENSMUST00000196476 984 ntBASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rc3h1Q4VGL6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Gm8602-201ENSMUST00000184045 607 ntBASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Gm5035-201ENSMUST00000215581 927 ntBASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rc3h1Q4VGL6 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Gm15806-201ENSMUST00000120696 955 ntBASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Gm2495-201ENSMUST00000191160 466 ntBASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.05■□□□□ 0.16
Rc3h1Q4VGL6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms