Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl5Q3UTQ8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl5Q3UTQ8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Cdkl5Q3UTQ8 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl5Q3UTQ8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cdkl5Q3UTQ8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Gm13453-201ENSMUST00000118708 357 ntBASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Gm17837-201ENSMUST00000186435 985 ntBASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.16■□□□□ 0.18
Cdkl5Q3UTQ8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Gm15393-201ENSMUST00000120499 219 ntBASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Cdkl5Q3UTQ8 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdkl5Q3UTQ8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cdkl5Q3UTQ8 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.14■□□□□ 0.18
Cdkl5Q3UTQ8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cdkl5Q3UTQ8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms