Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lins1Q3U1D0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lins1Q3U1D0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Lins1Q3U1D0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Lins1Q3U1D0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lins1Q3U1D0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lins1Q3U1D0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lins1Q3U1D0 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lins1Q3U1D0 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Gm43094-201ENSMUST00000196549 921 ntBASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lins1Q3U1D0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lins1Q3U1D0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lins1Q3U1D0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lins1Q3U1D0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lins1Q3U1D0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Lins1Q3U1D0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lins1Q3U1D0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lins1Q3U1D0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lins1Q3U1D0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lins1Q3U1D0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lins1Q3U1D0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lins1Q3U1D0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lins1Q3U1D0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lins1Q3U1D0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lins1Q3U1D0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lins1Q3U1D0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms