Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Gm8749-201ENSMUST00000117737 331 ntBASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Gm5035-201ENSMUST00000215581 927 ntBASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccbe1Q3MI99 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 AW822252-206ENSMUST00000208904 237 ntBASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccbe1Q3MI99 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccbe1Q3MI99 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccbe1Q3MI99 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccbe1Q3MI99 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Gm11452-201ENSMUST00000122376 690 ntBASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccbe1Q3MI99 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms