Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.45□□□□□ -0.58
Trim63Q38HM4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Gm8584-201ENSMUST00000171982 758 ntBASIC11.45□□□□□ -0.58
Trim63Q38HM4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Gm26571-201ENSMUST00000181399 666 ntBASIC11.45□□□□□ -0.58
Trim63Q38HM4 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.45□□□□□ -0.58
Trim63Q38HM4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.45□□□□□ -0.58
Trim63Q38HM4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.45□□□□□ -0.58
Trim63Q38HM4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.45□□□□□ -0.58
Trim63Q38HM4 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Gm27405-201ENSMUST00000184201 112 ntBASIC11.44□□□□□ -0.58
Trim63Q38HM4 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.44□□□□□ -0.58
Trim63Q38HM4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.44□□□□□ -0.58
Trim63Q38HM4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim63Q38HM4 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim63Q38HM4 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim63Q38HM4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms