Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ptchd3Q0EEE2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Gm8000-201ENSMUST00000188378 592 ntBASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Gm43514-201ENSMUST00000198852 424 ntBASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ptchd3Q0EEE2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ptchd3Q0EEE2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Gm15427-201ENSMUST00000117288 531 ntBASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ptchd3Q0EEE2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Ptchd3Q0EEE2 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ptchd3Q0EEE2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ptchd3Q0EEE2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ptchd3Q0EEE2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ptchd3Q0EEE2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ptchd3Q0EEE2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms