Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Gm15770-201ENSMUST00000117498 584 ntBASIC13.34□□□□□ -0.27
Hoxc4Q08624 Gm13829-201ENSMUST00000119600 138 ntBASIC13.34□□□□□ -0.27
Hoxc4Q08624 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hoxc4Q08624 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hoxc4Q08624 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Hoxc4Q08624 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hoxc4Q08624 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Gm11814-201ENSMUST00000119515 929 ntBASIC13.33□□□□□ -0.28
Hoxc4Q08624 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.33□□□□□ -0.28
Hoxc4Q08624 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Hoxc4Q08624 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hoxc4Q08624 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.32□□□□□ -0.28
Hoxc4Q08624 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.32□□□□□ -0.28
Hoxc4Q08624 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.32□□□□□ -0.28
Hoxc4Q08624 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.32□□□□□ -0.28
Hoxc4Q08624 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Gm14127-201ENSMUST00000117906 678 ntBASIC13.32□□□□□ -0.28
Hoxc4Q08624 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Hoxc4Q08624 Gm15824-201ENSMUST00000119516 955 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms