Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.7□□□□□ -0.22
Sox4Q06831 Gm22189-201ENSMUST00000103822 86 ntBASIC13.7□□□□□ -0.22
Sox4Q06831 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Gm29741-201ENSMUST00000192667 421 ntBASIC13.7□□□□□ -0.22
Sox4Q06831 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.7□□□□□ -0.22
Sox4Q06831 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.7□□□□□ -0.22
Sox4Q06831 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.7□□□□□ -0.22
Sox4Q06831 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sox4Q06831 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sox4Q06831 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sox4Q06831 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Sox4Q06831 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Sox4Q06831 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sox4Q06831 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sox4Q06831 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Sox4Q06831 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Gm7488-201ENSMUST00000117148 684 ntBASIC13.69□□□□□ -0.22
Sox4Q06831 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.69□□□□□ -0.22
Sox4Q06831 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sox4Q06831 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.69□□□□□ -0.22
Sox4Q06831 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sox4Q06831 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Sox4Q06831 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.69□□□□□ -0.22
Sox4Q06831 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.69□□□□□ -0.22
Sox4Q06831 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.69□□□□□ -0.22
Sox4Q06831 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Sox4Q06831 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.69□□□□□ -0.22
Sox4Q06831 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox4Q06831 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox4Q06831 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox4Q06831 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox4Q06831 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.68□□□□□ -0.22
Sox4Q06831 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Sox4Q06831 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sox4Q06831 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox4Q06831 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.68□□□□□ -0.22
Sox4Q06831 Gm13385-201ENSMUST00000121089 220 ntBASIC13.68□□□□□ -0.22
Sox4Q06831 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.68□□□□□ -0.22
Sox4Q06831 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox4Q06831 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.68□□□□□ -0.22
Sox4Q06831 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.68□□□□□ -0.22
Sox4Q06831 Gm8927-201ENSMUST00000181978 981 ntBASIC13.68□□□□□ -0.22
Sox4Q06831 Gm28760-201ENSMUST00000185995 736 ntBASIC13.68□□□□□ -0.22
Sox4Q06831 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sox4Q06831 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms