Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Thbs3Q05895 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Thbs3Q05895 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.25□□□□□ -0.45
Thbs3Q05895 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Thbs3Q05895 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.25□□□□□ -0.45
Thbs3Q05895 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Gm27306-201ENSMUST00000183970 107 ntBASIC12.25□□□□□ -0.45
Thbs3Q05895 Gm43703-201ENSMUST00000200523 763 ntBASIC12.25□□□□□ -0.45
Thbs3Q05895 Gm7775-201ENSMUST00000218871 853 ntBASIC12.25□□□□□ -0.45
Thbs3Q05895 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Thbs3Q05895 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Thbs3Q05895 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Thbs3Q05895 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.25□□□□□ -0.45
Thbs3Q05895 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.25□□□□□ -0.45
Thbs3Q05895 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.25□□□□□ -0.45
Thbs3Q05895 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.25□□□□□ -0.45
Thbs3Q05895 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs3Q05895 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Thbs3Q05895 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Thbs3Q05895 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.24□□□□□ -0.45
Thbs3Q05895 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Thbs3Q05895 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.24□□□□□ -0.45
Thbs3Q05895 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.24□□□□□ -0.45
Thbs3Q05895 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.24□□□□□ -0.45
Thbs3Q05895 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.24□□□□□ -0.45
Thbs3Q05895 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.24□□□□□ -0.45
Thbs3Q05895 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.24□□□□□ -0.45
Thbs3Q05895 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.24□□□□□ -0.45
Thbs3Q05895 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Thbs3Q05895 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.24□□□□□ -0.45
Thbs3Q05895 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.24□□□□□ -0.45
Thbs3Q05895 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Thbs3Q05895 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs3Q05895 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.23□□□□□ -0.45
Thbs3Q05895 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Thbs3Q05895 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Thbs3Q05895 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs3Q05895 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms