Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.74□□□□□ -0.37
Scn1bP97952 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.74□□□□□ -0.37
Scn1bP97952 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.74□□□□□ -0.37
Scn1bP97952 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Scn1bP97952 Gm27459-201ENSMUST00000184860 107 ntBASIC12.74□□□□□ -0.37
Scn1bP97952 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.74□□□□□ -0.37
Scn1bP97952 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.74□□□□□ -0.37
Scn1bP97952 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Scn1bP97952 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Scn1bP97952 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn1bP97952 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Scn1bP97952 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.73□□□□□ -0.37
Scn1bP97952 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Scn1bP97952 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Scn1bP97952 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Scn1bP97952 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.73□□□□□ -0.37
Scn1bP97952 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.73□□□□□ -0.37
Scn1bP97952 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.73□□□□□ -0.37
Scn1bP97952 Gm11452-201ENSMUST00000122376 690 ntBASIC12.73□□□□□ -0.37
Scn1bP97952 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC12.73□□□□□ -0.37
Scn1bP97952 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.73□□□□□ -0.37
Scn1bP97952 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.73□□□□□ -0.37
Scn1bP97952 Gm34391-201ENSMUST00000203706 907 ntBASIC12.73□□□□□ -0.37
Scn1bP97952 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Scn1bP97952 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.73□□□□□ -0.37
Scn1bP97952 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Scn1bP97952 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.73□□□□□ -0.37
Scn1bP97952 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Scn1bP97952 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn1bP97952 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Scn1bP97952 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Scn1bP97952 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Scn1bP97952 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.72□□□□□ -0.37
Scn1bP97952 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Gm13464-201ENSMUST00000119418 935 ntBASIC12.72□□□□□ -0.37
Scn1bP97952 Gm15173-201ENSMUST00000122049 433 ntBASIC12.72□□□□□ -0.37
Scn1bP97952 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.72□□□□□ -0.37
Scn1bP97952 Gm6089-201ENSMUST00000197666 938 ntBASIC12.72□□□□□ -0.37
Scn1bP97952 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.72□□□□□ -0.37
Scn1bP97952 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.72□□□□□ -0.37
Scn1bP97952 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Scn1bP97952 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Scn1bP97952 Gm10819-201ENSMUST00000099988 561 ntBASIC12.72□□□□□ -0.37
Scn1bP97952 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Scn1bP97952 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn1bP97952 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Scn1bP97952 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Scn1bP97952 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms