Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thumpd3P97770 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thumpd3P97770 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Thumpd3P97770 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Thumpd3P97770 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Thumpd3P97770 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thumpd3P97770 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thumpd3P97770 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thumpd3P97770 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.21□□□□□ -0.13
Thumpd3P97770 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thumpd3P97770 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thumpd3P97770 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Thumpd3P97770 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Thumpd3P97770 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Thumpd3P97770 Gm45098-201ENSMUST00000207179 657 ntBASIC14.21□□□□□ -0.13
Thumpd3P97770 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thumpd3P97770 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Thumpd3P97770 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Thumpd3P97770 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Thumpd3P97770 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thumpd3P97770 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Thumpd3P97770 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Thumpd3P97770 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Thumpd3P97770 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Thumpd3P97770 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Thumpd3P97770 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.21□□□□□ -0.14
Thumpd3P97770 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Thumpd3P97770 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Thumpd3P97770 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Thumpd3P97770 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Thumpd3P97770 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.21□□□□□ -0.14
Thumpd3P97770 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.2□□□□□ -0.14
Thumpd3P97770 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Thumpd3P97770 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.2□□□□□ -0.14
Thumpd3P97770 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.2□□□□□ -0.14
Thumpd3P97770 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.2□□□□□ -0.14
Thumpd3P97770 Gm37230-201ENSMUST00000194491 818 ntBASIC14.2□□□□□ -0.14
Thumpd3P97770 Gm7774-201ENSMUST00000200064 533 ntBASIC14.2□□□□□ -0.14
Thumpd3P97770 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.2□□□□□ -0.14
Thumpd3P97770 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.2□□□□□ -0.14
Thumpd3P97770 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Thumpd3P97770 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Thumpd3P97770 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Thumpd3P97770 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.19□□□□□ -0.14
Thumpd3P97770 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Thumpd3P97770 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.19□□□□□ -0.14
Thumpd3P97770 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.19□□□□□ -0.14
Thumpd3P97770 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.19□□□□□ -0.14
Thumpd3P97770 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.19□□□□□ -0.14
Thumpd3P97770 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.19□□□□□ -0.14
Thumpd3P97770 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.19□□□□□ -0.14
Thumpd3P97770 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.19□□□□□ -0.14
Thumpd3P97770 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.19□□□□□ -0.14
Thumpd3P97770 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.19□□□□□ -0.14
Thumpd3P97770 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Thumpd3P97770 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Thumpd3P97770 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Thumpd3P97770 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms