Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Gm13369-201ENSMUST00000119442 987 ntBASIC17.4■□□□□ 0.38
Nkx2-3P97334 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.4■□□□□ 0.38
Nkx2-3P97334 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Gm7029-201ENSMUST00000173226 450 ntBASIC17.4■□□□□ 0.38
Nkx2-3P97334 Gm5370-201ENSMUST00000187187 574 ntBASIC17.4■□□□□ 0.38
Nkx2-3P97334 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-3P97334 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nkx2-3P97334 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Gm5940-201ENSMUST00000117582 1068 ntBASIC17.39■□□□□ 0.37
Nkx2-3P97334 Gm1335-201ENSMUST00000121653 386 ntBASIC17.39■□□□□ 0.37
Nkx2-3P97334 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.39■□□□□ 0.37
Nkx2-3P97334 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.39■□□□□ 0.37
Nkx2-3P97334 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Gm4271-201ENSMUST00000174444 973 ntBASIC17.39■□□□□ 0.37
Nkx2-3P97334 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.39■□□□□ 0.37
Nkx2-3P97334 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.39■□□□□ 0.37
Nkx2-3P97334 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.39■□□□□ 0.37
Nkx2-3P97334 Gm7399-201ENSMUST00000032395 858 ntBASIC17.39■□□□□ 0.37
Nkx2-3P97334 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.39■□□□□ 0.37
Nkx2-3P97334 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-3P97334 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.38■□□□□ 0.37
Nkx2-3P97334 Gm11434-201ENSMUST00000122379 629 ntBASIC17.38■□□□□ 0.37
Nkx2-3P97334 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.38■□□□□ 0.37
Nkx2-3P97334 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Gm43179-201ENSMUST00000198797 275 ntBASIC17.38■□□□□ 0.37
Nkx2-3P97334 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Gm17823-201ENSMUST00000217830 1006 ntBASIC17.38■□□□□ 0.37
Nkx2-3P97334 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-3P97334 Gm8706-201ENSMUST00000197372 1491 ntBASIC17.37■□□□□ 0.37
Nkx2-3P97334 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Gm45880-201ENSMUST00000213041 853 ntBASIC17.37■□□□□ 0.37
Nkx2-3P97334 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC17.37■□□□□ 0.37
Nkx2-3P97334 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Nkx2-3P97334 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms