Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.42□□□□□ -0.42
H3f3aP84244 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
H3f3aP84244 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
H3f3aP84244 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.41□□□□□ -0.42
H3f3aP84244 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
H3f3aP84244 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
H3f3aP84244 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.41□□□□□ -0.42
H3f3aP84244 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
H3f3aP84244 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.41□□□□□ -0.42
H3f3aP84244 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.41□□□□□ -0.42
H3f3aP84244 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
H3f3aP84244 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.41□□□□□ -0.42
H3f3aP84244 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
H3f3aP84244 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H3f3aP84244 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
H3f3aP84244 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Gm14719-201ENSMUST00000121891 340 ntBASIC12.4□□□□□ -0.42
H3f3aP84244 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.4□□□□□ -0.42
H3f3aP84244 Gm5425-201ENSMUST00000214125 459 ntBASIC12.4□□□□□ -0.42
H3f3aP84244 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.4□□□□□ -0.42
H3f3aP84244 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.4□□□□□ -0.42
H3f3aP84244 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
H3f3aP84244 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H3f3aP84244 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
H3f3aP84244 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.43
H3f3aP84244 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
H3f3aP84244 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3f3aP84244 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H3f3aP84244 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3f3aP84244 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3f3aP84244 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H3f3aP84244 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3f3aP84244 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3f3aP84244 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
H3f3aP84244 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3f3aP84244 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
H3f3aP84244 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.39□□□□□ -0.43
H3f3aP84244 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
H3f3aP84244 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H3f3aP84244 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.39□□□□□ -0.43
H3f3aP84244 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.39□□□□□ -0.43
H3f3aP84244 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3f3aP84244 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3f3aP84244 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H3f3aP84244 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.39□□□□□ -0.43
H3f3aP84244 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H3f3aP84244 Gm29741-201ENSMUST00000192667 421 ntBASIC12.39□□□□□ -0.43
H3f3aP84244 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.39□□□□□ -0.43
H3f3aP84244 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms