Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.35□□□□□ -0.11
Msx3P70354 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.35□□□□□ -0.11
Msx3P70354 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
Msx3P70354 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Msx3P70354 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.35□□□□□ -0.11
Msx3P70354 Gm8410-201ENSMUST00000117225 605 ntBASIC14.35□□□□□ -0.11
Msx3P70354 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Msx3P70354 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.35□□□□□ -0.11
Msx3P70354 Gm27702-201ENSMUST00000184512 56 ntBASIC14.35□□□□□ -0.11
Msx3P70354 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Msx3P70354 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.35□□□□□ -0.11
Msx3P70354 Gm8396-201ENSMUST00000057361 823 ntBASIC14.35□□□□□ -0.11
Msx3P70354 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Msx3P70354 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Msx3P70354 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Msx3P70354 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Msx3P70354 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Msx3P70354 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Gm12428-201ENSMUST00000119844 727 ntBASIC14.34□□□□□ -0.11
Msx3P70354 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Gm25144-201ENSMUST00000179561 110 ntBASIC14.34□□□□□ -0.11
Msx3P70354 Gm25352-201ENSMUST00000179815 110 ntBASIC14.34□□□□□ -0.11
Msx3P70354 Gm33320-201ENSMUST00000192232 530 ntBASIC14.34□□□□□ -0.11
Msx3P70354 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Msx3P70354 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Msx3P70354 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Msx3P70354 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Msx3P70354 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Msx3P70354 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Msx3P70354 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Msx3P70354 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Msx3P70354 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Msx3P70354 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.33□□□□□ -0.12
Msx3P70354 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.33□□□□□ -0.12
Msx3P70354 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Msx3P70354 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Msx3P70354 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Msx3P70354 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Msx3P70354 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msx3P70354 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msx3P70354 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msx3P70354 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Msx3P70354 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msx3P70354 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.32□□□□□ -0.12
Msx3P70354 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msx3P70354 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msx3P70354 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.32□□□□□ -0.12
Msx3P70354 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msx3P70354 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Msx3P70354 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms