Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.25□□□□□ -0.13
Ybx1P62960 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.25□□□□□ -0.13
Ybx1P62960 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ybx1P62960 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Gm13392-201ENSMUST00000117708 150 ntBASIC14.25□□□□□ -0.13
Ybx1P62960 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Ybx1P62960 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.25□□□□□ -0.13
Ybx1P62960 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.25□□□□□ -0.13
Ybx1P62960 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.25□□□□□ -0.13
Ybx1P62960 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ybx1P62960 Gm6091-201ENSMUST00000098307 165 ntBASIC14.25□□□□□ -0.13
Ybx1P62960 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ybx1P62960 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.25□□□□□ -0.13
Ybx1P62960 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.25□□□□□ -0.13
Ybx1P62960 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.25□□□□□ -0.13
Ybx1P62960 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ybx1P62960 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ybx1P62960 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.24□□□□□ -0.13
Ybx1P62960 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.24□□□□□ -0.13
Ybx1P62960 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Ybx1P62960 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.24□□□□□ -0.13
Ybx1P62960 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.24□□□□□ -0.13
Ybx1P62960 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.24□□□□□ -0.13
Ybx1P62960 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ybx1P62960 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ybx1P62960 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ybx1P62960 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ybx1P62960 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ybx1P62960 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.23□□□□□ -0.13
Ybx1P62960 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.23□□□□□ -0.13
Ybx1P62960 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ybx1P62960 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Gm11814-201ENSMUST00000119515 929 ntBASIC14.23□□□□□ -0.13
Ybx1P62960 Gm14660-201ENSMUST00000119809 575 ntBASIC14.23□□□□□ -0.13
Ybx1P62960 Gm8062-201ENSMUST00000139696 444 ntBASIC14.23□□□□□ -0.13
Ybx1P62960 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.23□□□□□ -0.13
Ybx1P62960 Gm45784-201ENSMUST00000188360 142 ntBASIC14.23□□□□□ -0.13
Ybx1P62960 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.23□□□□□ -0.13
Ybx1P62960 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.23□□□□□ -0.13
Ybx1P62960 Gm45841-201ENSMUST00000207700 164 ntBASIC14.23□□□□□ -0.13
Ybx1P62960 Gm45331-201ENSMUST00000209868 554 ntBASIC14.23□□□□□ -0.13
Ybx1P62960 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ybx1P62960 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.23□□□□□ -0.13
Ybx1P62960 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ybx1P62960 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ybx1P62960 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Ybx1P62960 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms