Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Rps28P62858 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Rps28P62858 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC8.11□□□□□ -1.11
Rps28P62858 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC8.11□□□□□ -1.11
Rps28P62858 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Rps28P62858 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC8.11□□□□□ -1.11
Rps28P62858 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Rps28P62858 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Gm45597-201ENSMUST00000211524 1994 ntBASIC8.11□□□□□ -1.11
Rps28P62858 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC8.11□□□□□ -1.11
Rps28P62858 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Gm10652-201ENSMUST00000199790 2622 ntBASIC8.11□□□□□ -1.11
Rps28P62858 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Gm37422-201ENSMUST00000193794 4718 ntBASIC8.11□□□□□ -1.11
Rps28P62858 Gm43365-201ENSMUST00000196522 2106 ntBASIC8.11□□□□□ -1.11
Rps28P62858 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Rps28P62858 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Rps28P62858 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC8.1□□□□□ -1.11
Rps28P62858 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Rps28P62858 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Rps28P62858 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Gm42463-201ENSMUST00000198041 4886 ntBASIC8.1□□□□□ -1.11
Rps28P62858 Gm37931-201ENSMUST00000194686 2866 ntBASIC8.1□□□□□ -1.11
Rps28P62858 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Rps28P62858 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Rps28P62858 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC8.1□□□□□ -1.11
Rps28P62858 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC8.1□□□□□ -1.11
Rps28P62858 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC8.1□□□□□ -1.11
Rps28P62858 Gm37608-201ENSMUST00000195696 1880 ntBASIC8.1□□□□□ -1.11
Rps28P62858 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC8.1□□□□□ -1.11
Rps28P62858 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
Rps28P62858 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Rps28P62858 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC8.1□□□□□ -1.11
Rps28P62858 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Rps28P62858 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC8.1□□□□□ -1.11
Rps28P62858 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rps28P62858 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rps28P62858 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rps28P62858 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Rps28P62858 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rps28P62858 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC8.09□□□□□ -1.11
Rps28P62858 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC8.09□□□□□ -1.11
Rps28P62858 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
Rps28P62858 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rps28P62858 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Rps28P62858 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Rps28P62858 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms