Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lrch1P62046 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lrch1P62046 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrch1P62046 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
Lrch1P62046 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.33■□□□□ 0.2
Lrch1P62046 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrch1P62046 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrch1P62046 Mir698-201ENSMUST00000102164 109 ntBASIC16.33■□□□□ 0.2
Lrch1P62046 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
Lrch1P62046 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.33■□□□□ 0.2
Lrch1P62046 Gm5637-201ENSMUST00000153890 1119 ntBASIC16.33■□□□□ 0.2
Lrch1P62046 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lrch1P62046 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.33■□□□□ 0.2
Lrch1P62046 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.33■□□□□ 0.2
Lrch1P62046 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.33■□□□□ 0.2
Lrch1P62046 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrch1P62046 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrch1P62046 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lrch1P62046 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrch1P62046 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC16.33■□□□□ 0.2
Lrch1P62046 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.33■□□□□ 0.2
Lrch1P62046 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lrch1P62046 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrch1P62046 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrch1P62046 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrch1P62046 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lrch1P62046 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lrch1P62046 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Lrch1P62046 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.32■□□□□ 0.2
Lrch1P62046 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.32■□□□□ 0.2
Lrch1P62046 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Gm13369-201ENSMUST00000119442 987 ntBASIC16.32■□□□□ 0.2
Lrch1P62046 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.32■□□□□ 0.2
Lrch1P62046 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.32■□□□□ 0.2
Lrch1P62046 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC16.32■□□□□ 0.2
Lrch1P62046 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.32■□□□□ 0.2
Lrch1P62046 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lrch1P62046 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.32■□□□□ 0.2
Lrch1P62046 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lrch1P62046 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.31■□□□□ 0.2
Lrch1P62046 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.31■□□□□ 0.2
Lrch1P62046 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lrch1P62046 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lrch1P62046 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lrch1P62046 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lrch1P62046 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lrch1P62046 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Lrch1P62046 Gm12997-201ENSMUST00000120207 640 ntBASIC16.31■□□□□ 0.2
Lrch1P62046 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Gm2991-201ENSMUST00000173338 480 ntBASIC16.31■□□□□ 0.2
Lrch1P62046 Gm2383-201ENSMUST00000181461 807 ntBASIC16.31■□□□□ 0.2
Lrch1P62046 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.31■□□□□ 0.2
Lrch1P62046 Gm37922-201ENSMUST00000195596 455 ntBASIC16.31■□□□□ 0.2
Lrch1P62046 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 AC155637.1-201ENSMUST00000218560 636 ntBASIC16.31■□□□□ 0.2
Lrch1P62046 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 BC037039-201ENSMUST00000192003 2205 ntBASIC16.31■□□□□ 0.2
Lrch1P62046 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lrch1P62046 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Lrch1P62046 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms