Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.23□□□□□ -0.61
Lmo4P61969 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Lmo4P61969 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.23□□□□□ -0.61
Lmo4P61969 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.23□□□□□ -0.61
Lmo4P61969 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Lmo4P61969 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Lmo4P61969 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Gm13612-201ENSMUST00000119276 390 ntBASIC11.22□□□□□ -0.61
Lmo4P61969 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.22□□□□□ -0.61
Lmo4P61969 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.22□□□□□ -0.61
Lmo4P61969 Gm38671-201ENSMUST00000200573 130 ntBASIC11.22□□□□□ -0.61
Lmo4P61969 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.22□□□□□ -0.61
Lmo4P61969 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Lmo4P61969 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Lmo4P61969 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Lmo4P61969 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Lmo4P61969 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
Lmo4P61969 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.21□□□□□ -0.61
Lmo4P61969 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.21□□□□□ -0.61
Lmo4P61969 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Lmo4P61969 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Lmo4P61969 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Lmo4P61969 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Lmo4P61969 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.21□□□□□ -0.61
Lmo4P61969 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.21□□□□□ -0.61
Lmo4P61969 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Lmo4P61969 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.21□□□□□ -0.61
Lmo4P61969 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.21□□□□□ -0.61
Lmo4P61969 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Lmo4P61969 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.21□□□□□ -0.61
Lmo4P61969 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.21□□□□□ -0.61
Lmo4P61969 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.21□□□□□ -0.61
Lmo4P61969 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.21□□□□□ -0.61
Lmo4P61969 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Lmo4P61969 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Lmo4P61969 Gm6091-201ENSMUST00000098307 165 ntBASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms