Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Sec61a1P61620 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.31□□□□□ -0.44
Sec61a1P61620 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sec61a1P61620 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Sec61a1P61620 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Sec61a1P61620 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sec61a1P61620 Mir6990-201ENSMUST00000183724 91 ntBASIC12.3□□□□□ -0.44
Sec61a1P61620 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.3□□□□□ -0.44
Sec61a1P61620 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.3□□□□□ -0.44
Sec61a1P61620 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Gm8396-201ENSMUST00000057361 823 ntBASIC12.3□□□□□ -0.44
Sec61a1P61620 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sec61a1P61620 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.3□□□□□ -0.44
Sec61a1P61620 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sec61a1P61620 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.3□□□□□ -0.44
Sec61a1P61620 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Gm43474-201ENSMUST00000196415 774 ntBASIC12.29□□□□□ -0.44
Sec61a1P61620 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Gm18041-201ENSMUST00000218210 618 ntBASIC12.29□□□□□ -0.44
Sec61a1P61620 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.29□□□□□ -0.44
Sec61a1P61620 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sec61a1P61620 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.29□□□□□ -0.44
Sec61a1P61620 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.29□□□□□ -0.44
Sec61a1P61620 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.29□□□□□ -0.44
Sec61a1P61620 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sec61a1P61620 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sec61a1P61620 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sec61a1P61620 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms