Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sox1P53783 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Sox1P53783 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Sox1P53783 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox1P53783 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Sox1P53783 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Sox1P53783 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox1P53783 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.16□□□□□ -0.14
Sox1P53783 Mospd4-201ENSMUST00000180618 576 ntBASIC14.16□□□□□ -0.14
Sox1P53783 Gm27772-201ENSMUST00000184900 187 ntBASIC14.16□□□□□ -0.14
Sox1P53783 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Sox1P53783 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox1P53783 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sox1P53783 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sox1P53783 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Sox1P53783 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox1P53783 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Sox1P53783 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.16□□□□□ -0.14
Sox1P53783 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Sox1P53783 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Sox1P53783 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sox1P53783 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sox1P53783 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sox1P53783 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.15□□□□□ -0.14
Sox1P53783 Gm5687-201ENSMUST00000118252 640 ntBASIC14.15□□□□□ -0.14
Sox1P53783 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 Gm27023-201ENSMUST00000182372 285 ntBASIC14.15□□□□□ -0.14
Sox1P53783 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.15□□□□□ -0.14
Sox1P53783 Gm37497-201ENSMUST00000195830 798 ntBASIC14.15□□□□□ -0.14
Sox1P53783 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.15□□□□□ -0.14
Sox1P53783 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 Gm10146-201ENSMUST00000072739 309 ntBASIC14.15□□□□□ -0.14
Sox1P53783 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.15□□□□□ -0.14
Sox1P53783 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.15□□□□□ -0.14
Sox1P53783 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sox1P53783 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sox1P53783 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.15□□□□□ -0.15
Sox1P53783 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.15□□□□□ -0.15
Sox1P53783 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Sox1P53783 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.14□□□□□ -0.15
Sox1P53783 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sox1P53783 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.14□□□□□ -0.15
Sox1P53783 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.14□□□□□ -0.15
Sox1P53783 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.14□□□□□ -0.15
Sox1P53783 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.14□□□□□ -0.15
Sox1P53783 Gm43378-201ENSMUST00000199336 582 ntBASIC14.14□□□□□ -0.15
Sox1P53783 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.14□□□□□ -0.15
Sox1P53783 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.14□□□□□ -0.15
Sox1P53783 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox1P53783 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms